CDS

Accession Number TCMCG024C53089
gbkey CDS
Protein Id XP_022035427.1
Location join(175853535..175853703,175853895..175853977,175854909..175854960,175855065..175855190,175855293..175855372,175855477..175855659,175855732..175856038,175856796..175856939,175857018..175857145)
Gene LOC110937333
GeneID 110937333
Organism Helianthus annuus

Protein

Length 423aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA396063
db_source XM_022179735.2
Definition RNA-binding protein BRN1 isoform X1 [Helianthus annuus]

EGGNOG-MAPPER Annotation

COG_category A
Description CUGBP Elav-like family member
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13207        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008219        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009626        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009967        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010647        [VIEW IN EMBL-EBI]
GO:0012501        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023056        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034050        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048573        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080151        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000031        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001023        [VIEW IN EMBL-EBI]
GO:2001025        [VIEW IN EMBL-EBI]
GO:2001038        [VIEW IN EMBL-EBI]
GO:2001040        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGAACCTCACATGCTGCGAAAACACAGTGACGACTGCGTGAAGCTCTTCGTCGGTCAAGTTCCTAAACACATGACGGAGCCACAACTCATAGCAATGTTCAAAGAATTCGCACTTGTCGACGAAGTCAACATCATCAAAGACAAAGCAACGCGAGCTTCTCGAGGTTGTTGTTTTGTTATATGTCCGAATAGAGAGGAAGCTGACAAGGCTGTGGATGCGTTTCATAATAAGAAGACTTTGACCGGGGCATCTAGTCCATTGCAAGTGAAGTATGCTGATGGCGAGTTGGAACGACTGGAACACAAGCTTTTTATTGGTATGCTTCCCAAGAATGTTTCCGAGAGTGAAGTGTCAGCATTATTTTCACAATATGGAACCCTAAAAGACCTACAAATTCTCAGAGGTTCTCAACAAACAAGTAAAGGCTGTGCTTTTGTGAAGTACGAGACAAAAGAACAAGCTGTTGCTGCTATAGAGGGCCTTAATGGAAAACACAAGATGGAGGGTTCAACTGTCCCTTTGGTTGTTAAATGGGCAGACACCGAAAAGGAAAGACAAGCTAGAAAAGCTCAGAAGGCTCAATCACTGGCTTCTACTTTGGCAAATGTTGACCCGAGTCAACATCCGTCTTTATTTGGAGCACTTCCAATGGGATACATGTCACCATATAATGGTTATGGGTATCAGGCTACTGGAACTTATGGGCTCATGCAGTATCGCCTTCCCCCGGTGCAGAATCAGCCCGCTTTTACCAACCTGAGCCCAACTCAAGCAAATGCATTACGAGCAGGCTCTCCAAGAAACTATGCGGTTCCACCAGCCGGTTATATGGGCTCTGCTTATCCAACCGTTCCCAGGCTTCAATATCCTTTGGCGTTTTCTGGCGGAATCAGGCCTTTTAGTGGCCCGTCTAGCCCAGTACCACCAGAAGCTGCAAATAACCATCCCGCAACTTCTTCAACTGTCAGTGGAAGTGTCCCAGACCATGTCGAAGGTCCACCTGGCGCTAATCTGTTCATTTATCACATCCCTCAAGATTTCGGGGATGAAGATCTTGCAAAGGCATTTCAAGGGTTTGGAAGGGTTTTAAGCTCCAAGGTTTTCGTCGATAAGGCAACTGGTGTTAGCAAGTGCTTCGGGTTTGTTAGTTACGACTCCCCAGCTGCTGCACAATCTGCAATAAATACAATGAATGGGTATCAGTTAGGTGGTAAGAAGTTGAAGGTTCAACTTAAAAGAGACAACAAACAAAATAAAGCTTACTGA
Protein:  
MAEPHMLRKHSDDCVKLFVGQVPKHMTEPQLIAMFKEFALVDEVNIIKDKATRASRGCCFVICPNREEADKAVDAFHNKKTLTGASSPLQVKYADGELERLEHKLFIGMLPKNVSESEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHKMEGSTVPLVVKWADTEKERQARKAQKAQSLASTLANVDPSQHPSLFGALPMGYMSPYNGYGYQATGTYGLMQYRLPPVQNQPAFTNLSPTQANALRAGSPRNYAVPPAGYMGSAYPTVPRLQYPLAFSGGIRPFSGPSSPVPPEAANNHPATSSTVSGSVPDHVEGPPGANLFIYHIPQDFGDEDLAKAFQGFGRVLSSKVFVDKATGVSKCFGFVSYDSPAAAQSAINTMNGYQLGGKKLKVQLKRDNKQNKAY